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* academic/verilog: Fix download url.Willy Sudiarto Raharjo2022-11-05
* academic/yices2: Added (Satisfiability modulo theories solver).William PC2022-11-05
* academic/OpenMM: Added (high-perf toolkit for molecular simulation)William PC2022-10-29
* academic/gem5: Added (open-source system-level & CPU simulator)William PC2022-10-29
* academic/cadabra2: Updated for version 2.4.2.1.Alexander Verbovetsky2022-10-29
* academic/paml: Remove stray symlink.Matteo Bernardini2022-10-20
* academic/metalwalls: Added (Molecular modelling systems).William PC2022-10-19
* academic/DRAMsim3: Added (DRAM simulator).William PC2022-10-18
* academic/cdo: Updated to version 2.1.0ArTourter2022-10-16
* academic/voro++: Added (A 3D Voronoi cell software library)William PC2022-10-15
* academic/mathics: sympy renamed python2-sympy in REQUIRES.David Melik2022-10-15
* academic/pamlX: Rebuild for paml update.Petar Petrov2022-10-15
* academic/paml: Updated for version 4.10.5.Petar Petrov2022-10-15
* academic/muscle5: Added (MUSCLE 5: Next-generation MUSCLE)Petar Petrov2022-10-15
* academic/DRAMSim2: Added (A cycle accurate DRAM simulator)William PC2022-10-15
* academic/jalview: Updated for version 2.11.2.4.Petar Petrov2022-10-15
* academic/IGV: Updated for version 2.14.1.Petar Petrov2022-10-15
* academic/hyphy: Updated for version 2.5.42.Petar Petrov2022-10-15
* academic/gelemental: Updated for version 2.0.1.Petar Petrov2022-10-15
* academic/bowtie: Updated for version 1.3.1.Petar Petrov2022-10-15
* academic/cryptominisat: Updated for version 5.11.3.Alan Aversa2022-10-15
* academic/zotero: updated for version 6.0.15afhpayne2022-10-15
* academic/rpy2: Upgrade to version 3.5.5brobr2022-10-15
* academic/samtools: Ugrade to version 1.16.1brobr2022-10-15
* academic/bcftools: Upgrade to version 1.16brobr2022-10-15
* academic/pysam: use shipped htslib-1.15.1brobr2022-10-15
* academic/cdo: Updated for version 2.0.6ArTourter2022-10-14
* academic/openboard: Fix build with newer ffmpeg.Willy Sudiarto Raharjo2022-10-13
* academic/scipy3: Update READMEIsaac Yu2022-10-10
* academic/z3: Updated for version 4.11.2.Nick Smallbone2022-10-08
* academic/cadabra2: Updated for version 2.4.0.2.Alexander Verbovetsky2022-10-08
* academic/fet: Updated for version 6.6.2.R.S.Ananda Murthy2022-10-08
* academic/plus42: Updated for version 1.0.11.Juan M. Lasca2022-10-08
* academic/maxima: Updated for version 5.46.0.Judah Milgram2022-10-08
* academic/openboard: Updated for version 1.6.4.Willy Sudiarto Raharjo2022-10-08
* academic/gromacs: Added (gromacs project)William PC2022-10-01
* academic/octave: Updated for version 7.2.0Kyle Guinn2022-09-25
* academic/mumsa: Added (A tool to assess MSA quality)Petar Petrov2022-09-25
* academic/units: Updated for version 2.22ArTourter2022-09-10
* academic/grace: Update download url.ArTourter2022-09-10
* academic/iqtree: Added (Efficient phylogenomic software by ML)Petar Petrov2022-09-09
* academic/vCAPS_coevolution: Added (Coevolution Analysis)Petar Petrov2022-09-09
* academic/bpp1.9-phyl: Added (Bio++ 1.9 Phyl Library)Petar Petrov2022-09-09
* academic/bpp1.9-seq: Added (Bio++ 1.9 Seq Library)Petar Petrov2022-09-09
* academic/bpp1.9-numcalc: Added (Bio++ 1.9 NumCalc Library)Petar Petrov2022-09-09
* academic/bpp1.9-utils: Added (Bio++ 1.9 Utils Library)Petar Petrov2022-09-09
* academic/prank-msa: Added (probabilistic multiple alignment program)Petar Petrov2022-09-08
* academic/bppsuite: Added (Bio++ program suite)Petar Petrov2022-09-08
* academic/bpp-popgen: Added (Bio++ Population Genetics Library)Petar Petrov2022-09-08
* academic/bpp-phyl-omics: Added (Bio++ Phylogenetic Omics Library)Petar Petrov2022-09-08
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