academic/EMBASSY: Updated for version 6.6.0.

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>

2 files changed, 45 insertions, 45 deletions

diff --git a/academic/EMBASSY/EMBASSY.SlackBuild b/academic/EMBASSY/EMBASSY.SlackBuild
index 48efb18e7e..a5fd088e4d 100644
--- a/academic/EMBASSY/EMBASSY.SlackBuild
+++ b/academic/EMBASSY/EMBASSY.SlackBuild
@@ -2,7 +2,7 @@
 
 # Slackware build script for EMBASSY
 
-# Copyright 2011-2012  Petar Petrov, ppetrov@paju.oulu.fi
+# Copyright 2011-2013  Petar Petrov, petar.petrov@student.oulu.fi
 # All rights reserved.
 #
 # Redistribution and use of this script, with or without modification, is
@@ -23,7 +23,7 @@
 #  ADVISED OF THE POSSIBILITY OF SUCH DAMAGE
 
 PRGNAM=EMBASSY
-VERSION=${VERSION:-6.5.7} # Keep this the same version as EMBOSS
+VERSION=${VERSION:-6.6.0} # Keep this the same version as EMBOSS
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 
@@ -56,7 +56,7 @@ fi
 
 # EMBASSY components and their versions
 CBSTOOLS=CBSTOOLS-1.0.0.650
-CLUSTALOMEGA=CLUSTALOMEGA-0.2.0.650
+CLUSTALOMEGA=CLUSTALOMEGA-1.1.0
 DOMAINATRIX=DOMAINATRIX-0.1.650
 DOMALIGN=DOMALIGN-0.1.650
 DOMSEARCH=DOMSEARCH-0.1.650
@@ -105,10 +105,10 @@ tar xvf $CWD/$VIENNA.tar.gz
 
 chown -R root:root .
 find -L . \
- \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 -o -perm 511 \) \
- -exec chmod 755 {} \; -o \
- \( -perm 666 -o -perm 664 -o -perm 600 -o -perm 444 -o -perm 440 -o -perm 400 \) \
- -exec chmod 644 {} \;
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+  -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
 
 # Build CBSTOOLS
 cd $TMP/$PRGNAM-$VERSION/$CBSTOOLS
diff --git a/academic/EMBASSY/EMBASSY.info b/academic/EMBASSY/EMBASSY.info
index 0f39b438ba..f4456f4d50 100644
--- a/academic/EMBASSY/EMBASSY.info
+++ b/academic/EMBASSY/EMBASSY.info
@@ -1,44 +1,44 @@
 PRGNAM="EMBASSY"
-VERSION="6.5.7"
+VERSION="6.6.0"
 HOMEPAGE="http://emboss.sourceforge.net/embassy/"
-DOWNLOAD="ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/CBSTOOLS-1.0.0.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/CLUSTALOMEGA-0.2.0.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/DOMAINATRIX-0.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/DOMALIGN-0.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/DOMSEARCH-0.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/EMNU-1.05.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/ESIM4-1.0.0.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/HMMER-2.3.2.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/IPRSCAN-4.3.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/MEME-4.7.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/MSE-3.0.0.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/MYEMBOSS-6.5.1.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/MYEMBOSSDEMO-6.5.0.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/PHYLIPNEW-3.69.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/SIGNATURE-0.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/STRUCTURE-0.1.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/TOPO-2.0.650.tar.gz \
-	ftp://emboss.open-bio.org/pub/EMBOSS/old/6.5.0/VIENNA-1.7.2.650.tar.gz"
-MD5SUM="4913776ee5ff93ae839762107f8d8bc8 \
-f24967741eb2fe9c3bccd6458276e127 \
-d7539f6ee6f25bb401ffad2802441010 \
-079a6371390201fa39f19c25cce8d5ba \
-5fd0e943f4db9f9ea008eabd68dc60e7 \
-6e0b7ac797554c52f413d23e5781e71b \
-2ca9069bf9c87697bf52c77b25a659d7 \
-d82017cc68ce3d381e8cc6dcfd68f39e \
-81720978302afc8d855b316651be5b2a \
-4d2dac5a2d66ad43552271be81c1cd1b \
-3b26ecbdf8032680f1de148f5d91d776 \
-54e9ca4dadd0b988f8964f886c6f026c \
-f3cb3421a79e7e6466686628de346b20 \
-488d117d32a391a9b53c60260595e67b \
-361773a6f1b0b862f5cbf3d4d3ee1fa0 \
-40afa99f995f34275005b76f8b05c337 \
-5a0b0c478cece42cc564599b91f9c1cf \
-633c16e28818b0dc4d3ae084a7beae56"
+DOWNLOAD="ftp://emboss.open-bio.org/pub/EMBOSS/CBSTOOLS-1.0.0.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/CLUSTALOMEGA-1.1.0.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/DOMAINATRIX-0.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/DOMALIGN-0.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/DOMSEARCH-0.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/EMNU-1.05.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/ESIM4-1.0.0.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/HMMER-2.3.2.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/IPRSCAN-4.3.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/MEME-4.7.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/MSE-3.0.0.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/MYEMBOSS-6.5.1.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/MYEMBOSSDEMO-6.5.0.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/PHYLIPNEW-3.69.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/SIGNATURE-0.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/STRUCTURE-0.1.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/TOPO-2.0.650.tar.gz \
+	ftp://emboss.open-bio.org/pub/EMBOSS/VIENNA-1.7.2.650.tar.gz"
+MD5SUM="237577573d9cbe5df18bac8dae17240b \
+e4243a86c6127d99b1d501a54a7fbbf3 \
+5cbc136ded7826a0066e51074738a5a1 \
+d74e58418bf1a4de29c1f945830e9e8a \
+f01cea0480c0e9abbd07196084a64451 \
+e66d6083191ac1cc804ea80e494005ee \
+b4b0f551f5c3901228e77475aa95e856 \
+4871d5c8bb0f3cc37f5f34b3126ab171 \
+3330f1ee2f4f4237fc40ac6b4b6f8099 \
+b2ce9b52ec0540bd56634045664ea2ce \
+b79a17a2ad25fe6ffc8d23c7bbf8bc0b \
+3b8096d4f5869c6856c60f53fa5f5131 \
+d1468bcd15d48374d0d59e14e4c4a6b5 \
+b7da94cc7c0f1f6791cd4312a64c225a \
+344da0793ab3a85a68b52b3bdf49929a \
+fa89b9b0cab3c7fe5b86a56de2a94686 \
+9a32d2263a6c67927ab1c237890cc222 \
+49c748441e0e3fd9b86429be3db1d025"
 DOWNLOAD_x86_64=""
 MD5SUM_x86_64=""
 REQUIRES="EMBOSS"
 MAINTAINER="Petar Petrov"
-EMAIL="ppetrov@paju.oulu.fi"
+EMAIL="petar.petrov@student.oulu.fi"