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authorPetar Petrov <slackalaxy@gmail.com>2018-06-17 22:41:54 +0100
committerDavid Spencer <idlemoor@slackbuilds.org>2018-06-17 22:41:54 +0100
commit1861748c093979a87b9916053d24921893af754d (patch)
treeabd53792ca35cf19d440b251020537fe30686709
parentb7907309fbadd1f994c8fa0d625f5c14ba106aec (diff)
downloadslackbuilds-1861748c093979a87b9916053d24921893af754d.tar.gz
academic/PhyML: Updated for version 3.3.20180214.
Signed-off-by: David Spencer <idlemoor@slackbuilds.org>
-rw-r--r--academic/PhyML/PhyML.SlackBuild10
-rw-r--r--academic/PhyML/PhyML.info6
2 files changed, 7 insertions, 9 deletions
diff --git a/academic/PhyML/PhyML.SlackBuild b/academic/PhyML/PhyML.SlackBuild
index d82f9370f5..1aa61b75ae 100644
--- a/academic/PhyML/PhyML.SlackBuild
+++ b/academic/PhyML/PhyML.SlackBuild
@@ -2,7 +2,7 @@
# Slackware build script for PhyML
-# Copyright 2011-2017 Petar Petrov slackalaxy@gmail.com
+# Copyright 2011-2018 Petar Petrov slackalaxy@gmail.com
# All rights reserved.
#
# Redistribution and use of this script, with or without modification, is
@@ -26,7 +26,7 @@
PRGNAM=PhyML
SRCNAM=$(echo $PRGNAM | tr A-Z a-z)
-VERSION=${VERSION:-3.3.20170530}
+VERSION=${VERSION:-3.3.20180214}
BUILD=${BUILD:-1}
TAG=${TAG:-_SBo}
@@ -163,13 +163,11 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr
# Include some examples
mkdir -p $PKG/usr/share/$PRGNAM
-cp -a \
- examples/{lg4x,phyrex_input_files,nexus_example.nxs,nucleic,proteic} \
- $PKG/usr/share/$PRGNAM
+cp -a examples $PKG/usr/share/$PRGNAM
mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
cp -a \
- doc/$SRCNAM-manual.pdf AUTHORS ChangeLog COPYING LICENSE README \
+ doc/{$SRCNAM-manual.pdf,ref.bib,$SRCNAM-manual.tex,fig} README \
$PKG/usr/doc/$PRGNAM-$VERSION
cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
cat $CWD/References > $PKG/usr/doc/$PRGNAM-$VERSION/References
diff --git a/academic/PhyML/PhyML.info b/academic/PhyML/PhyML.info
index 24bd673857..bdf7a9261f 100644
--- a/academic/PhyML/PhyML.info
+++ b/academic/PhyML/PhyML.info
@@ -1,8 +1,8 @@
PRGNAM="PhyML"
-VERSION="3.3.20170530"
+VERSION="3.3.20180214"
HOMEPAGE="https://github.com/stephaneguindon/phyml/"
-DOWNLOAD="http://ponce.cc/slackware/sources/repo/phyml-3.3.20170530.tar.gz"
-MD5SUM="8801c23dbdb295b6bbcd417f0010bb6a"
+DOWNLOAD="https://github.com/stephaneguindon/phyml/archive/v3.3.20180214/phyml-3.3.20180214.tar.gz"
+MD5SUM="85bb0f62b575e7169f8c62b2f3dafee5"
DOWNLOAD_x86_64=""
MD5SUM_x86_64=""
REQUIRES="openmpi"