blob: 2ad3f0803b5e9500f7b1cd626521ed39ebe95b59 (
plain)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
|
SPAdes: a single-cell genome assembler
SPAdes (St. Petersburg genome assembler) is intended for both standard
isolates and single-cell MDA bacteria assemblies.
SPAdes generates single-cell assemblies, providing information about
genomes of uncultivatable bacteria that vastly exceeds what may be
obtained via traditional metagenomics studies.
Citing:
Nurk S et al. Assembling Single-Cell Genomes and Mini-Metagenomes From
Chimeric MDA Products. Journal of Computational Biology 20(10) (2013),
714-737. doi:10.1089/cmb.2013.0084
NOTE: This will not build on a 32bit system.
|
