From 2ac64806386fede92fe5e789516808cd23316083 Mon Sep 17 00:00:00 2001 From: Petar Petrov Date: Sat, 14 Dec 2013 10:02:36 +0700 Subject: academic/vcftools: Added (A program designed for working with VCF). Signed-off-by: Willy Sudiarto Raharjo --- academic/vcftools/README | 18 ++++++++++++++++++ 1 file changed, 18 insertions(+) create mode 100644 academic/vcftools/README (limited to 'academic/vcftools/README') diff --git a/academic/vcftools/README b/academic/vcftools/README new file mode 100644 index 0000000000..de03f3235e --- /dev/null +++ b/academic/vcftools/README @@ -0,0 +1,18 @@ +VCFtools is a program package designed for working with VCF files, +such as those generated by the 1000 Genomes Project. The aim of +VCFtools is to provide methods for working with VCF files: validating, +merging, comparing and calculate some basic population genetic +statistics. + +VCFtools supports the VCF format v4.0. The vcf-validator, Perl API and +scripts now support also VCF format v4.2 and maintain backward +compatibility with older versions. + +If you make use of VCFtools in your research, the authors would +appreciate a citation of the following paper: + +The Variant Call Format and VCFtools, +Petr Danecek, Adam Auton, Goncalo Abecasis, Cornelis A. Albers, +Eric Banks, Mark A. DePristo, Robert Handsaker, Gerton Lunter, +Gabor Marth, Stephen T. Sherry, Gilean McVean, Richard Durbin +and 1000 Genomes Project Analysis Group, Bioinformatics, 2011 -- cgit v1.2.3