diff options
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/pysam/pysam.SlackBuild | 14 | ||||
| -rw-r--r-- | academic/pysam/pysam.info | 8 |
2 files changed, 11 insertions, 11 deletions
diff --git a/academic/pysam/pysam.SlackBuild b/academic/pysam/pysam.SlackBuild index 1145e63733..48a8ef263f 100644 --- a/academic/pysam/pysam.SlackBuild +++ b/academic/pysam/pysam.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for pysam -# Copyright 2017 Rob van Nues +# Copyright 2017-2020 Rob van Nues # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -24,8 +24,8 @@ PRGNAM=pysam -VERSION=${VERSION:-0.15.4} -BUILD=${BUILD:-2} +VERSION=${VERSION:-0.16.0.1} +BUILD=${BUILD:-1} TAG=${TAG:-_SBo} #set which python version to install it for @@ -75,10 +75,10 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -###When pysam gets linked to htslib-1.10 this can be done again: -##use system htslib instead: -#export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX -#export HTSLIB_INCLUDE_DIR=/usr/include +### pysam now linked to htslib-1.10 so this can be done again: +##use system htslib: +export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX +export HTSLIB_INCLUDE_DIR=/usr/include #the source does not allow 'read' to 'other', which could cause a problem on reloading a Jupyter-notebook chmod 644 pysam.egg-info/* diff --git a/academic/pysam/pysam.info b/academic/pysam/pysam.info index 8e87762f0f..19fac12bab 100644 --- a/academic/pysam/pysam.info +++ b/academic/pysam/pysam.info @@ -1,10 +1,10 @@ PRGNAM="pysam" -VERSION="0.15.4" +VERSION="0.16.0.1" HOMEPAGE="https://github.com/pysam-developers/pysam" -DOWNLOAD="https://pypi.python.org/packages/source/p/pysam/pysam-0.15.4.tar.gz" -MD5SUM="fed157466d6e267e32593119c05247b2" +DOWNLOAD="https://pypi.python.org/packages/source/p/pysam/pysam-0.16.0.1.tar.gz" +MD5SUM="5b4b73431f2511727f4fef43a67b392e" DOWNLOAD_x86_64="" MD5SUM_x86_64="" -REQUIRES="python3-Cython" +REQUIRES="python3-Cython htslib" MAINTAINER="Rob van Nues" EMAIL="sborg63@disroot.org" |