diff options
Diffstat (limited to 'academic/mpb')
-rw-r--r-- | academic/mpb/README | 37 | ||||
-rw-r--r-- | academic/mpb/mpb.SlackBuild | 154 | ||||
-rw-r--r-- | academic/mpb/mpb.info | 10 | ||||
-rw-r--r-- | academic/mpb/slack-desc | 19 |
4 files changed, 220 insertions, 0 deletions
diff --git a/academic/mpb/README b/academic/mpb/README new file mode 100644 index 0000000000..5d6b26c927 --- /dev/null +++ b/academic/mpb/README @@ -0,0 +1,37 @@ +mpb (computes electromagnetic band structures and modes) + +MPB is a free and open-source software package for computing electromagnetic +band structures and modes. It saves results in hdf5 format. + +You may wish to also install: h5utils + +You very probably want to build a multi-processor version of this +code by adding the "--with-openmp" configure option. + + +Configuration: +If the build script can find the ATLAS libraries, it will adapt the configure +options to use them rather than the default lapack. + +You can add additional options to the command line using the environment +variable SBOPTIONS_MPB; e.g. to enable MPI (multi-processor calculation) +using openmp, use: + +SBOPTIONS_MPB="--with-openmp" ./mpb.Slackbuild + +Alternatively, if building non-interactively (e.g. if using slpkg), use/create +the file /etc/sbo_pkg_options.conf since this slackbuild script will search it +for options. Simply include a line starting "mpb:" followed by options, e.g.: + +mpb: --with-openmp + +If you want to use mpich instead of openmp, you will have to recompile the +installed slackware fftw library with two additional configure options, i.e. +not only "--with-mpi" but also "--enable-type-prefix". + +Note: + +This mpb build script does *two* passes. This is so that when MPI +support is enabled, the first compiles the mpb-data utility, then the second +builds the full MPI version. The resulting package includes both, with any +MPI version of the files replacing the non- MPI version. diff --git a/academic/mpb/mpb.SlackBuild b/academic/mpb/mpb.SlackBuild new file mode 100644 index 0000000000..11cecb63cb --- /dev/null +++ b/academic/mpb/mpb.SlackBuild @@ -0,0 +1,154 @@ +#!/bin/sh + +# Slackware build script for mpb + +# Copyright 2019,2020 Paul Kinsler, U.K. +# All rights reserved. +# +# Redistribution and use of this script, with or without modification, is +# permitted provided that the following conditions are met: +# +# 1. Redistributions of this script must retain the above copyright +# notice, this list of conditions and the following disclaimer. +# +# THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED +# WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF +# MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO +# EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, +# SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, +# PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; +# OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, +# WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR +# OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF +# ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. + +PRGNAM=mpb +VERSION=${VERSION:-1.10.0} +BUILD=${BUILD:-1} +TAG=${TAG:-_SBo} + +if [ -z "$ARCH" ]; then + case "$( uname -m )" in + i?86) ARCH=i586 ;; + arm*) ARCH=arm ;; + *) ARCH=$( uname -m ) ;; + esac +fi + +CWD=$(pwd) +TMP=${TMP:-/tmp/SBo} +PKG=$TMP/package-$PRGNAM +OUTPUT=${OUTPUT:-/tmp} + +if [ "$ARCH" = "i586" ]; then + SLKCFLAGS="-O2 -march=i586 -mtune=i686" + LIBDIRSUFFIX="" +elif [ "$ARCH" = "i686" ]; then + SLKCFLAGS="-O2 -march=i686 -mtune=i686" + LIBDIRSUFFIX="" +elif [ "$ARCH" = "x86_64" ]; then + SLKCFLAGS="-O2 -fPIC" + LIBDIRSUFFIX="64" +else + SLKCFLAGS="-O2" + LIBDIRSUFFIX="" +fi + +# change annoying underscores into hyphens +SVERSION=$(echo $VERSION | tr '_' '-') +# make a custom list of doc files in advance +DOCFILES="AUTHORS COPYING COPYRIGHT TODO README.md NEWS.md" + +set -e + +rm -rf $PKG +mkdir -p $TMP $PKG $OUTPUT +cd $TMP +rm -rf $PRGNAM-$SVERSION +tar xvf $CWD/$PRGNAM-$SVERSION.tar.gz +cd $PRGNAM-$SVERSION +chown -R root:root . +find -L . \ + \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \ + -o -perm 511 \) -exec chmod 755 {} \; -o \ + \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ + -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; + +# if there is no configure script, try to build one! +if [ ! -f ./configure ] ; then + ./autogen.sh +fi + +LOCALCONFIGS= +XDBFILE=/etc/sbo_pkg_options.conf + +if [ -f ${XDBFILE} ] ; then + LOCALCONFIGS=${LOCALCONFIGS}" "$(grep "^${PRGNAM}:" ${XDBFILE} | grep -v '^#' | awk -F: '{print$2}') + echo Build options selected by file: LOCALCONFIGS=${LOCALCONFIGS} +fi +if [ -n "${SBOPTIONS_MPB}" ] ; then + LOCALCONFIGS=${LOCALCONFIGS}" "${SBOPTIONS_MPB} + echo Build options selected by environment: LOCALCONFIGS=${LOCALCONFIGS} +fi + + +# check for the Atlas replacement for blas; if the libraries are found, +# add the configure option accordingly + +if [ -f /usr/lib${LIBDIRSUFFIX}/libatlas.a ] ; then + if [ -f /usr/lib{$LIBDIRSUFFIX}/libatlas.so ] ; then + echo "NOTICE: libatlas was found, configure --with-blas=atlas" + LOCALCONFIGS=${LOCALCONFIGS}" --with-blas=atlas" + fi +fi + +# LOCALCONFIGS without any mpi requests so I can do a no-mpi compile. +SPLOCALCONFIGS=$(echo $LOCALCONFIGS | sed s/--with-mpi// | sed s/--with-openmp//) + + +# do two passes; first with no mpi (to get mpb-data), +# then a second *with* mpi + +CFLAGS="$SLKCFLAGS" \ +CPPFLAGS="$SLKCFLAGS" \ +./configure \ + --prefix=/usr \ + --mandir=/usr/man \ + --libdir=/usr/lib${LIBDIRSUFFIX} \ + --docdir=/usr/doc/$PRGNAM-$VERSION \ + --build=$ARCH-slackware-linux \ + $SPLOCALCONFIGS + +make +make install DESTDIR=$PKG + + +CFLAGS="$SLKCFLAGS" \ +CPPFLAGS="$SLKCFLAGS" \ +./configure \ + --prefix=/usr \ + --mandir=/usr/man \ + --libdir=/usr/lib${LIBDIRSUFFIX} \ + --docdir=/usr/doc/$PRGNAM-$VERSION \ + --build=$ARCH-slackware-linux \ + $LOCALCONFIGS + +make +make install DESTDIR=$PKG + +find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ + | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true + +find $PKG/usr/man -type f -exec gzip -9 {} \; +for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done + + +mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION +install -m 0644 $DOCFILES $PKG/usr/doc/$PRGNAM-$VERSION +cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild + +mkdir -p $PKG/install +cat $CWD/slack-desc > $PKG/install/slack-desc + +cd $PKG +/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz} diff --git a/academic/mpb/mpb.info b/academic/mpb/mpb.info new file mode 100644 index 0000000000..b3575b5b0a --- /dev/null +++ b/academic/mpb/mpb.info @@ -0,0 +1,10 @@ +PRGNAM="mpb" +VERSION="1.10.0" +HOMEPAGE="https://github.com/NanoComp/mpb" +DOWNLOAD="https://github.com/NanoComp/mpb/releases/download/v1.10.0/mpb-1.10.0.tar.gz" +MD5SUM="92f91cf5e0206e2e4531b780b45469c4" +DOWNLOAD_x86_64="" +MD5SUM_x86_64="" +REQUIRES="lapack hdf5 libctl" +MAINTAINER="PaulKinsler" +EMAIL="dr.paul@kinsler.org" diff --git a/academic/mpb/slack-desc b/academic/mpb/slack-desc new file mode 100644 index 0000000000..90b4bc501d --- /dev/null +++ b/academic/mpb/slack-desc @@ -0,0 +1,19 @@ +# HOW TO EDIT THIS FILE: +# The "handy ruler" below makes it easier to edit a package description. +# Line up the first '|' above the ':' following the base package name, and +# the '|' on the right side marks the last column you can put a character in. +# You must make exactly 11 lines for the formatting to be correct. It's also +# customary to leave one space after the ':' except on otherwise blank lines. + + |-----handy-ruler------------------------------------------------------| +mpb: mpb (computation of electromagnetic band structures and modes) +mpb: +mpb: MPB is a free and open-source software package for +mpb: computing electromagnetic band structures and modes. +mpb: +mpb: +mpb: +mpb: Homepage: https://github.com/NanoComp/mpb +mpb: +mpb: +mpb: |