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diff --git a/academic/cistrome-CEAS/README b/academic/cistrome-CEAS/README new file mode 100644 index 0000000000..ca8504e954 --- /dev/null +++ b/academic/cistrome-CEAS/README @@ -0,0 +1,14 @@ +CEAS: Cis-regulatory Element Annotation System + +This is a tool designed to characterize genome-wide protein-DNA +interaction patterns from ChIP-chip and ChIP-Seq of both sharp and +broad binding factors. As a stand-alone extension of our web +application CEAS, it provides statistics on ChIP enrichment at +important genome features such as specific chromosome, promoters, gene +bodies, or exons, and infers genes most likely to be regulated by a +binding factor. CEAS also enables biologists to visualize the average +ChIP enrichment signals over specific genomic features, allowing +continuous and broad ChIP enrichment to be perceived which might be +too subtle to detect from ChIP peaks alone. + +A recommended package to install is R. |