diff options
Diffstat (limited to 'academic/RBio/autotoolize.diff')
| -rw-r--r-- | academic/RBio/autotoolize.diff | 191 |
1 files changed, 191 insertions, 0 deletions
diff --git a/academic/RBio/autotoolize.diff b/academic/RBio/autotoolize.diff new file mode 100644 index 0000000000..709474efa6 --- /dev/null +++ b/academic/RBio/autotoolize.diff @@ -0,0 +1,191 @@ +diff --git a/Demo/Makefile.am b/Demo/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Demo/Makefile.am +@@ -0,0 +1,16 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/Include ++LDADD = $(top_builddir)/Source/librbio.la -lufconfig ++ ++check_PROGRAMS = \ ++ RBdemo ++ ++RBdemo_SOURCES = RBdemo.c ++ ++RB = \ ++ ../RBio/private/west0479.rua ++ ++check-local: $(check_PROGRAMS) $(RB) ++ ./RBdemo < ../RBio/private/west0479.rua ++ ++clean-local: ++ -$(RM) temp.rb +diff --git a/Makefile.am b/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Makefile.am +@@ -0,0 +1,3 @@ ++SUBDIRS = Source RBio/private Demo Tcov ++EXTRA_DIST = README.txt Doc/ChangeLog Doc/License.txt Doc/gpl.txt ++include_HEADERS = Include/RBio.h +diff --git a/RBio/private/Makefile.am b/RBio/private/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/RBio/private/Makefile.am +@@ -0,0 +1,7 @@ ++dist_noinst_DATA = \ ++ bcsstk01.rb \ ++ farm.rb \ ++ lap_25.pse \ ++ lap_25.rb \ ++ west0479.rb \ ++ west0479.rua +diff --git a/Source/Makefile.am b/Source/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Source/Makefile.am +@@ -0,0 +1,16 @@ ++AM_CPPFLAGS = -I$(top_srcdir)/Include ++ ++RBIOSRC = \ ++ RBio.c ++ ++lib_LTLIBRARIES = librbio.la ++noinst_LTLIBRARIES = librbioi.la librbiol.la ++ ++librbioi_la_SOURCES = $(RBIOSRC) ++librbioi_la_CPPFLAGS = $(AM_CPPFLAGS) -DINT ++ ++librbiol_la_SOURCES = $(RBIOSRC) ++ ++librbio_la_SOURCES = ++librbio_la_LIBADD = librbioi.la librbiol.la ++librbio_la_LDFLAGS = -no-undefined -version-info 2:0:0 +diff --git a/Tcov/Makefile.am b/Tcov/Makefile.am +new file mode 100644 +--- /dev/null ++++ b/Tcov/Makefile.am +@@ -0,0 +1,94 @@ ++AM_CC = gcc ++AM_CFLAGS = -O0 -g --coverage ++AM_CPPFLAGS = -I$(top_srcdir)/Include ++LDADD = -lufconfig ++ ++dist_noinst_DATA = \ ++ matrices/Tina_DisCog.tar.gz \ ++ matrices/dwg961a.tar.gz \ ++ matrices/m4.rb \ ++ matrices/m4b.rb \ ++ matrices/mhd1280a.tar.gz \ ++ matrices/mhd1280b.tar.gz \ ++ matrices/plskz362.tar.gz \ ++ matrices/qc324.tar.gz \ ++ matrices/s4.rb \ ++ matrices/west0067.tar.gz \ ++ mangled/1.rb \ ++ mangled/2.rb \ ++ mangled/3.rb \ ++ mangled/4.rb \ ++ mangled/5.rb \ ++ mangled/6.rb \ ++ mangled/7.rb \ ++ mangled/8.rb \ ++ mangled/9.rb \ ++ mangled/10.rb \ ++ mangled/11.rb \ ++ mangled/12.rb \ ++ mangled/13.rb \ ++ mangled/14.rb \ ++ mangled/15.rb ++ ++check_PROGRAMS = \ ++ RBdemo \ ++ RBtest ++ ++RBio.c: ../Source/RBio.c ++ $(LN_S) -f $< $@ ++ ++RBdemo.c: ../Demo/RBdemo.c ++ $(LN_S) -f $< $@ ++ ++RBdemo_SOURCES = RBdemo.c RBio.c ++RBtest_SOURCES = RBtest.c RBio.c ++ ++TAR = tar -O -xvvzf ++ ++RB = \ ++ ../RBio/private/bcsstk01.rb \ ++ ../RBio/private/farm.rb \ ++ ../RBio/private/lap_25.pse \ ++ ../RBio/private/lap_25.rb \ ++ ../RBio/private/west0479.rb \ ++ ../RBio/private/west0479.rua \ ++ $(dist_noinst_DATA) ++ ++check-local: $(check_PROGRAMS) $(RB) ++ -./RBdemo ../RBio/private/bcsstk01.rb ++ -./RBdemo ../RBio/private/farm.rb ++ -./RBdemo ../RBio/private/lap_25.pse ++ -./RBdemo ../RBio/private/lap_25.rb ++ -./RBdemo ../RBio/private/west0479.rb ++ -./RBdemo ../RBio/private/west0479.rua ++ -$(TAR) matrices/dwg961a.tar.gz dwg961a/dwg961a.rb | ./RBdemo ++ -$(TAR) matrices/mhd1280a.tar.gz mhd1280a/mhd1280a.rb | ./RBdemo ++ -$(TAR) matrices/mhd1280b.tar.gz mhd1280b/mhd1280b.rb | ./RBdemo ++ -$(TAR) matrices/qc324.tar.gz qc324/qc324.rb | ./RBdemo ++ -$(TAR) matrices/plskz362.tar.gz plskz362/plskz362.rb | ./RBdemo ++ -$(TAR) matrices/west0067.tar.gz west0067/west0067.rb | ./RBdemo ++ -$(TAR) matrices/Tina_DisCog.tar.gz Tina_DisCog/Tina_DisCog.rb | ./RBdemo ++ -./RBdemo matrices/m4.rb ++ -./RBdemo matrices/s4.rb ++ -./RBdemo matrices/m4b.rb ++ -./RBdemo mangled/1.rb ++ -./RBdemo mangled/2.rb ++ -./RBdemo mangled/3.rb ++ -./RBdemo mangled/4.rb ++ -./RBdemo mangled/5.rb ++ -./RBdemo mangled/6.rb ++ -./RBdemo mangled/7.rb ++ -./RBdemo mangled/8.rb ++ -./RBdemo mangled/9.rb ++ -./RBdemo mangled/10.rb ++ -./RBdemo mangled/11.rb ++ -./RBdemo mangled/12.rb ++ -./RBdemo mangled/13.rb ++ -./RBdemo mangled/14.rb ++ -./RBdemo mangled/15.rb ++ -./RBtest ++ -gcov *.c > gcov.out ++ -grep "#####" RBio.c.gcov | wc -l ++ ++clean-local: ++ -$(RM) gcov.out *.gcov *.gcda *.gcno temp*.rb +diff --git a/configure.ac b/configure.ac +new file mode 100644 +--- /dev/null ++++ b/configure.ac +@@ -0,0 +1,25 @@ ++AC_PREREQ([2.65]) ++AC_INIT([RBio], [2.0.0], [davis@cise.ufl.edu]) ++AC_CONFIG_SRCDIR([Source/RBio.c]) ++AC_CONFIG_HEADER([config.h]) ++AM_INIT_AUTOMAKE([foreign]) ++LT_INIT ++ ++AC_PROG_INSTALL ++AC_PROG_CC ++ ++LIBS_SAVED=$LIBS ++ ++AC_CHECK_LIB([ufconfig], [UFmalloc]) ++ ++AC_CHECK_HEADERS([stddef.h stdlib.h string.h]) ++ ++LIBS=$LIBS_SAVED ++ ++AC_CONFIG_FILES([ ++ Makefile ++ Demo/Makefile ++ RBio/private/Makefile ++ Source/Makefile ++ Tcov/Makefile]) ++AC_OUTPUT |