diff options
Diffstat (limited to 'academic/ImageJ')
| -rw-r--r-- | academic/ImageJ/ImageJ.SlackBuild | 27 | ||||
| -rw-r--r-- | academic/ImageJ/ImageJ.info | 10 | ||||
| -rw-r--r-- | academic/ImageJ/README | 10 | ||||
| -rw-r--r-- | academic/ImageJ/slack-desc | 10 |
4 files changed, 22 insertions, 35 deletions
diff --git a/academic/ImageJ/ImageJ.SlackBuild b/academic/ImageJ/ImageJ.SlackBuild index a10cf37730..5d230524af 100644 --- a/academic/ImageJ/ImageJ.SlackBuild +++ b/academic/ImageJ/ImageJ.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for ImageJ -# Copyright 2012 Petar Petrov, ppetrov@paju.oulu.fi +# Copyright 2012-2013 Petar Petrov, ppetrov@paju.oulu.fi # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -22,19 +22,19 @@ # OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. -PRGNAM=ImageJ -VERSION=${VERSION:-1.45} +PRGNAM=ImageJ +VERSION=${VERSION:-1.46} ARCH=noarch BUILD=${BUILD:-1} -TAG=${TAG:-_SBo} +TAG=${TAG:-_SBo} SRCNAM=ij -SRCVER=145 +SRCVER=146 CWD=$(pwd) -TMP=${TMP:-/tmp/SBo} +TMP=${TMP:-/tmp/SBo} PKG=$TMP/package-$PRGNAM -OUTPUT=${OUTPUT:-/tmp} +OUTPUT=${OUTPUT:-/tmp} set -e @@ -44,7 +44,6 @@ cd $TMP rm -rf $PRGNAM unzip $CWD/${SRCNAM}${SRCVER}.zip cd $PRGNAM -unzip $CWD/ucsd-plugins.zip chown -R root:root . find . \ \( -perm 777 -o -perm 775 -o -perm 711 -o -perm 555 -o -perm 511 \) \ @@ -55,22 +54,16 @@ find . \ mkdir -p $PKG/usr/share/$PRGNAM cp -a luts macros plugins ij.jar $PKG/usr/share/$PRGNAM -# Install bio-formats plugins -mkdir -p $PKG/usr/share/$PRGNAM/plugins/LOCI -cp -a $CWD/loci_tools.jar $PKG/usr/share/$PRGNAM/plugins/LOCI - -# Install UCSD confocal microscopy plugins -cp -a UCSD\ Plugins $PKG/usr/share/$PRGNAM/plugins/ - mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION cp -a README.html $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild # Fix permissions find $PKG -type d -exec chmod 755 {} \; -o \ - -type f -exec chmod 644 {} \; + -type f -exec chmod 644 {} \; -# Install wrapper of ij.jar +# Install the wrapper of ij.jar, taken from the link below: +# http://rsb.info.nih.gov/ij/download/linux/unix-script.txt install -D -m755 $CWD/imagej $PKG/usr/bin/imagej mkdir -p $PKG/usr/share/{applications,pixmaps} diff --git a/academic/ImageJ/ImageJ.info b/academic/ImageJ/ImageJ.info index 00fe254697..5bd65d54f4 100644 --- a/academic/ImageJ/ImageJ.info +++ b/academic/ImageJ/ImageJ.info @@ -1,12 +1,8 @@ PRGNAM="ImageJ" -VERSION="1.45" +VERSION="1.46" HOMEPAGE="http://rsb.info.nih.gov/ij/" -DOWNLOAD="http://rsb.info.nih.gov/ij/download/zips/ij145.zip \ - http://www.loci.wisc.edu/files/software/loci_tools.jar \ - http://rsbweb.nih.gov/ij/plugins/download/ucsd-plugins.zip" -MD5SUM="c0e0202c4a358e886ce1582dd2c9b830 \ - 2914600d36ce0c077526a0380b59f099 \ - 277dec926cc27ade8ef01b8ae4bb69cb" +DOWNLOAD="http://rsb.info.nih.gov/ij/download/zips/ij146.zip" +MD5SUM="61b96882acc037e72d5da3c41396cad6" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="jdk" diff --git a/academic/ImageJ/README b/academic/ImageJ/README index 3c15f5325e..75120f2ee0 100644 --- a/academic/ImageJ/README +++ b/academic/ImageJ/README @@ -26,9 +26,7 @@ ImageJ was designed with an open architecture that provides extensibility via Java plugins. User-written plugins make it possible to solve almost any image processing or analysis problem. -This includes the following additional plugins: -1) Bio-Formats. -2) UCSD confocal microscopy plugins. - -For a complete list of available plugins, check the corresponding -section at the program website. +NOTE ABOUT PLUGINS: +If you are looking for additional features, search for ImageJ plugins +already available at SBo (ij-plugins-*) or check the program website +for more. diff --git a/academic/ImageJ/slack-desc b/academic/ImageJ/slack-desc index 637ac00056..f74d9aff79 100644 --- a/academic/ImageJ/slack-desc +++ b/academic/ImageJ/slack-desc @@ -1,9 +1,9 @@ # HOW TO EDIT THIS FILE: -# The "handy ruler" below makes it easier to edit a package description. Line -# up the first '|' above the ':' following the base package name, and the '|' -# on the right side marks the last column you can put a character in. You must -# make exactly 11 lines for the formatting to be correct. It's also -# customary to leave one space after the ':'. +# The "handy ruler" below makes it easier to edit a package description. +# Line up the first '|' above the ':' following the base package name, and +# the '|' on the right side marks the last column you can put a character in. +# You must make exactly 11 lines for the formatting to be correct. It's also +# customary to leave one space after the ':' except on otherwise blank lines. |-----handy-ruler------------------------------------------------------| ImageJ: ImageJ (Image processing and analysis in Java) |