academic/sage-bin: Updated for version 9.4

Signed-off-by: Duncan Roe <duncan_roe@optusnet.com.au>
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>

4 files changed, 283 insertions, 8 deletions

diff --git a/academic/sage-bin/9.4.patch b/academic/sage-bin/9.4.patch
new file mode 100644
index 0000000000..307a558acb
--- /dev/null
+++ b/academic/sage-bin/9.4.patch
@@ -0,0 +1,258 @@
+--- opt/SageMath/local/lib/python3.9/site-packages/sage/combinat/posets/poset_examples.py.bu	2021-08-22 19:12:42.000000000 +1000
++++ opt/SageMath/local/lib/python3.9/site-packages/sage/combinat/posets/poset_examples.py	2022-01-02 13:10:42.447658457 +1100
+@@ -155,7 +155,7 @@
+ 
+     @staticmethod
+     def BooleanLattice(n, facade=None, use_subsets=False):
+-        """
++        r"""
+         Return the Boolean lattice containing `2^n` elements.
+ 
+         - ``n`` -- integer; number of elements will be `2^n`
+--- opt/SageMath/local/lib/python3.9/site-packages/traitlets/config/loader.py.bu	2021-08-22 22:00:01.000000000 +1000
++++ opt/SageMath/local/lib/python3.9/site-packages/traitlets/config/loader.py	2022-01-11 11:39:00.600018177 +1100
+@@ -792,7 +792,7 @@
+                 nargs = '?'
+             else:
+                 nargs = None
+-            if len(key) is 1:
++            if len(key) == 1:
+                 paa('-'+key, '--'+key, type=text_type, dest=value, nargs=nargs)
+             else:
+                 paa('--'+key, type=text_type, dest=value, nargs=nargs)
+@@ -801,7 +801,7 @@
+                 #
+                 self.alias_flags[self.aliases[key]] = value
+                 continue
+-            if len(key) is 1:
++            if len(key) == 1:
+                 paa('-'+key, '--'+key, action='append_const', dest='_flags', const=value)
+             else:
+                 paa('--'+key, action='append_const', dest='_flags', const=value)
+--- opt/SageMath/local/lib/python3.9/site-packages/psutil/_pslinux.py.bu	2021-08-22 21:58:18.000000000 +1000
++++ opt/SageMath/local/lib/python3.9/site-packages/psutil/_pslinux.py	2022-01-11 12:14:46.007349527 +1100
+@@ -548,7 +548,7 @@
+         # https://github.com/giampaolo/psutil/issues/200
+         # try to parse /proc/stat as a last resort
+         if num == 0:
+-            search = re.compile('cpu\d')
++            search = re.compile(r'cpu\d')
+             with open_text('%s/stat' % get_procfs_path()) as f:
+                 for line in f:
+                     line = line.split(' ')[0]
+@@ -1465,9 +1465,9 @@
+         @wrap_exceptions
+         def memory_full_info(
+                 self,
+-                _private_re=re.compile(b"Private.*:\s+(\d+)"),
+-                _pss_re=re.compile(b"Pss.*:\s+(\d+)"),
+-                _swap_re=re.compile(b"Swap.*:\s+(\d+)")):
++                _private_re=re.compile(br"Private.*:\s+(\d+)"),
++                _pss_re=re.compile(br"Pss.*:\s+(\d+)"),
++                _swap_re=re.compile(br"Swap.*:\s+(\d+)")):
+             basic_mem = self.memory_info()
+             # Note: using 3 regexes is faster than reading the file
+             # line by line.
+@@ -1580,7 +1580,7 @@
+             raise
+ 
+     @wrap_exceptions
+-    def num_ctx_switches(self, _ctxsw_re=re.compile(b'ctxt_switches:\t(\d+)')):
++    def num_ctx_switches(self, _ctxsw_re=re.compile(br'ctxt_switches:\t(\d+)')):
+         data = self._read_status_file()
+         ctxsw = _ctxsw_re.findall(data)
+         if not ctxsw:
+@@ -1593,7 +1593,7 @@
+             return _common.pctxsw(int(ctxsw[0]), int(ctxsw[1]))
+ 
+     @wrap_exceptions
+-    def num_threads(self, _num_threads_re=re.compile(b'Threads:\t(\d+)')):
++    def num_threads(self, _num_threads_re=re.compile(br'Threads:\t(\d+)')):
+         # Note: on Python 3 using a re is faster than iterating over file
+         # line by line. On Python 2 is the exact opposite, and iterating
+         # over a file on Python 3 is slower than on Python 2.
+@@ -1649,7 +1649,7 @@
+         return cext.proc_cpu_affinity_get(self.pid)
+ 
+     def _get_eligible_cpus(
+-            self, _re=re.compile(b"Cpus_allowed_list:\t(\d+)-(\d+)")):
++            self, _re=re.compile(br"Cpus_allowed_list:\t(\d+)-(\d+)")):
+         # See: https://github.com/giampaolo/psutil/issues/956
+         data = self._read_status_file()
+         match = _re.findall(data)
+@@ -1811,13 +1811,13 @@
+         return int(self._parse_stat_file()[2])
+ 
+     @wrap_exceptions
+-    def uids(self, _uids_re=re.compile(b'Uid:\t(\d+)\t(\d+)\t(\d+)')):
++    def uids(self, _uids_re=re.compile(br'Uid:\t(\d+)\t(\d+)\t(\d+)')):
+         data = self._read_status_file()
+         real, effective, saved = _uids_re.findall(data)[0]
+         return _common.puids(int(real), int(effective), int(saved))
+ 
+     @wrap_exceptions
+-    def gids(self, _gids_re=re.compile(b'Gid:\t(\d+)\t(\d+)\t(\d+)')):
++    def gids(self, _gids_re=re.compile(br'Gid:\t(\d+)\t(\d+)\t(\d+)')):
+         data = self._read_status_file()
+         real, effective, saved = _gids_re.findall(data)[0]
+         return _common.pgids(int(real), int(effective), int(saved))
+./opt/SageMath/local/lib/python3.9/site-packages/sage/symbolic/RCS
+diff -u -r1.1 expression_conversions.py
+--- opt/SageMath/local/lib/python3.9/site-packages/sage/symbolic/expression_conversions.py	2021/08/22 09:12:43	1.1
++++ opt/SageMath/local/lib/python3.9/site-packages/sage/symbolic/expression_conversions.py	2022/01/28 02:07:09
+@@ -969,7 +969,7 @@
+         super(FriCASConverter, self).__init__(sage.interfaces.fricas.fricas)
+ 
+     def pyobject(self, ex, obj):
+-        """
++        r"""
+         Return a string which, when evaluated by FriCAS, returns the
+         object as an expression.
+ 
+./opt/SageMath/local/lib/python3.9/site-packages/IPython/core/RCS
+diff -u -r1.1 oinspect.py
+./opt/SageMath/local/lib/python3.9/site-packages/requests/RCS
+diff -u -r1.1 api.py
+--- opt/SageMath/local/lib/python3.9/site-packages/requests/api.py	2021/08/22 11:52:24	1.1
++++ opt/SageMath/local/lib/python3.9/site-packages/requests/api.py	2022/01/28 00:49:42
+@@ -57,7 +57,7 @@
+ 
+ 
+ def get(url, params=None, **kwargs):
+-    """Sends a GET request.
++    r"""Sends a GET request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param params: (optional) Dictionary or bytes to be sent in the query string for the :class:`Request`.
+@@ -71,7 +71,7 @@
+ 
+ 
+ def options(url, **kwargs):
+-    """Sends a OPTIONS request.
++    r"""Sends a OPTIONS request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param \*\*kwargs: Optional arguments that ``request`` takes.
+@@ -84,7 +84,7 @@
+ 
+ 
+ def head(url, **kwargs):
+-    """Sends a HEAD request.
++    r"""Sends a HEAD request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param \*\*kwargs: Optional arguments that ``request`` takes.
+@@ -97,7 +97,7 @@
+ 
+ 
+ def post(url, data=None, json=None, **kwargs):
+-    """Sends a POST request.
++    r"""Sends a POST request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -111,7 +111,7 @@
+ 
+ 
+ def put(url, data=None, **kwargs):
+-    """Sends a PUT request.
++    r"""Sends a PUT request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -125,7 +125,7 @@
+ 
+ 
+ def patch(url, data=None, **kwargs):
+-    """Sends a PATCH request.
++    r"""Sends a PATCH request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -139,7 +139,7 @@
+ 
+ 
+ def delete(url, **kwargs):
+-    """Sends a DELETE request.
++    r"""Sends a DELETE request.
+ 
+     :param url: URL for the new :class:`Request` object.
+     :param \*\*kwargs: Optional arguments that ``request`` takes.
+diff -u -r1.1 models.py
+--- opt/SageMath/local/lib/python3.9/site-packages/requests/models.py	2021/08/22 11:52:24	1.1
++++ opt/SageMath/local/lib/python3.9/site-packages/requests/models.py	2022/01/28 00:45:51
+@@ -840,7 +840,7 @@
+         return content
+ 
+     def json(self, **kwargs):
+-        """Returns the json-encoded content of a response, if any.
++        r"""Returns the json-encoded content of a response, if any.
+ 
+         :param \*\*kwargs: Optional arguments that ``json.loads`` takes.
+         :raises ValueError: If the response body does not contain valid json.
+diff -u -r1.1 sessions.py
+--- opt/SageMath/local/lib/python3.9/site-packages/requests/sessions.py	2021/08/22 11:52:24	1.1
++++ opt/SageMath/local/lib/python3.9/site-packages/requests/sessions.py	2022/01/28 01:00:24
+@@ -490,7 +490,7 @@
+         return resp
+ 
+     def get(self, url, **kwargs):
+-        """Sends a GET request. Returns :class:`Response` object.
++        r"""Sends a GET request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param \*\*kwargs: Optional arguments that ``request`` takes.
+@@ -501,7 +501,7 @@
+         return self.request('GET', url, **kwargs)
+ 
+     def options(self, url, **kwargs):
+-        """Sends a OPTIONS request. Returns :class:`Response` object.
++        r"""Sends a OPTIONS request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param \*\*kwargs: Optional arguments that ``request`` takes.
+@@ -512,7 +512,7 @@
+         return self.request('OPTIONS', url, **kwargs)
+ 
+     def head(self, url, **kwargs):
+-        """Sends a HEAD request. Returns :class:`Response` object.
++        r"""Sends a HEAD request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param \*\*kwargs: Optional arguments that ``request`` takes.
+@@ -523,7 +523,7 @@
+         return self.request('HEAD', url, **kwargs)
+ 
+     def post(self, url, data=None, json=None, **kwargs):
+-        """Sends a POST request. Returns :class:`Response` object.
++        r"""Sends a POST request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -535,7 +535,7 @@
+         return self.request('POST', url, data=data, json=json, **kwargs)
+ 
+     def put(self, url, data=None, **kwargs):
+-        """Sends a PUT request. Returns :class:`Response` object.
++        r"""Sends a PUT request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -546,7 +546,7 @@
+         return self.request('PUT', url, data=data, **kwargs)
+ 
+     def patch(self, url, data=None, **kwargs):
+-        """Sends a PATCH request. Returns :class:`Response` object.
++        r"""Sends a PATCH request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param data: (optional) Dictionary, bytes, or file-like object to send in the body of the :class:`Request`.
+@@ -557,7 +557,7 @@
+         return self.request('PATCH', url,  data=data, **kwargs)
+ 
+     def delete(self, url, **kwargs):
+-        """Sends a DELETE request. Returns :class:`Response` object.
++        r"""Sends a DELETE request. Returns :class:`Response` object.
+ 
+         :param url: URL for the new :class:`Request` object.
+         :param \*\*kwargs: Optional arguments that ``request`` takes.
diff --git a/academic/sage-bin/9.4_sh b/academic/sage-bin/9.4_sh
new file mode 100644
index 0000000000..7e29552a0d
--- /dev/null
+++ b/academic/sage-bin/9.4_sh
@@ -0,0 +1,6 @@
+cp -a opt/SageMath/local/lib/python3.9/site-packages/sage/combinat/posets/poset_examples.py opt/SageMath/src/sage/combinat/posets
+cp -a opt/SageMath/local/lib/python3.9/site-packages/sage/combinat/posets/poset_examples.py opt/SageMath/pkgs/sagemath-standard/build/lib.linux-x86_64-3.9/sage/combinat/posets
+tar xf $CWD/debian_binaries-11.2.tar.xz -U -C opt/SageMath/local/lib64/gcc/x86_64-pc-linux-gnu/10.3.0
+tar xf $CWD/debian_libraries-11.2.tar.xz -U -C opt/SageMath/local/lib
+mkdir -p usr/lib64
+mv opt/SageMath/local/lib/libbrotlicommon.so* usr/lib64/
diff --git a/academic/sage-bin/sage-bin.SlackBuild b/academic/sage-bin/sage-bin.SlackBuild
index a81b408c5e..2ff263c6dd 100644
--- a/academic/sage-bin/sage-bin.SlackBuild
+++ b/academic/sage-bin/sage-bin.SlackBuild
@@ -25,11 +25,13 @@
 cd $(dirname $0) ; CWD=$(pwd)
 
 PRGNAM=sage-bin
-VERSION=${VERSION:-8.3}
-DEBVERSION=${DEBVERSION:-9}
+VERSION=${VERSION:-9.4}
+DEBVERSION=${DEBVERSION:-11}
 BUILD=${BUILD:-1}
 TAG=${TAG:-_SBo}
 PKGTYPE=${PKGTYPE:-tgz}
+SLK_VERSION=${SLK_VERSION:-$(cat /etc/slackware-version|cut -d' ' -f2)}
+[ $SLK_VERSION = 14.2 ] && PYTHON=python || PYTHON=python2
 
 if [ -z "$ARCH" ]; then
   case "$( uname -m )" in
@@ -63,6 +65,8 @@ mkdir -p $TMP $PKG $OUTPUT
 cd $PKG
 mkdir root proc opt
 tar xvf $CWD/sage-$VERSION-Debian_GNU_Linux_$DEBVERSION-$ARCH.tar.bz2 -C $PKG/opt
+[ ! -r $CWD/$VERSION.patch ] || patch -p0 < $CWD/$VERSION.patch
+[ ! -r $CWD/${VERSION}_sh ] || . $CWD/${VERSION}_sh
 chown -R root:root .
 find -L . \
  \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
@@ -71,8 +75,9 @@ find -L . \
   -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
 
 mkchroot .
-addchroot . python sed util-linux
+addchroot . $PYTHON sed util-linux
 chroot . <<////
+export SAGE_BANNER=bare
 mount -t proc proc proc
 opt/SageMath/sage < /dev/null # Run sage patch system
 umount proc
@@ -84,6 +89,7 @@ rm -rf Tools bin dev etc lib64 proc root sbin usr
 # and other junk
 rm -rf $PKG/opt/SageMath/.git
 
+mkdir -p $PKG/etc/profile.d
 install -D -m0755 $CWD/profile.d/sage.sh  $PKG/etc/profile.d
 install -D -m0755 $CWD/profile.d/sage.csh $PKG/etc/profile.d
 
@@ -103,8 +109,9 @@ for res in 16x16 32x32 64x64 128x128 ; do
     $PKG/usr/share/icons/hicolor/$res/mimetypes
 done
 
-find $PKG/opt/SageMath/local/share/man -type f -exec gzip -9 {} \;
-for i in $( find $PKG/opt/SageMath/local/share/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+# Some man pages and their symlinks are already gzipped
+find $PKG/opt/SageMath/local/share/man -type f ! -name '*.gz' -exec gzip -9 {} \;
+for i in $( find $PKG/opt/SageMath/local/share/man -type l ! -name '*.gz' ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
 
 mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
 cp -a opt/SageMath/*.{md,txt} $PKG/usr/doc/$PRGNAM-$VERSION
diff --git a/academic/sage-bin/sage-bin.info b/academic/sage-bin/sage-bin.info
index eddc8fbee5..90b93d6cf4 100644
--- a/academic/sage-bin/sage-bin.info
+++ b/academic/sage-bin/sage-bin.info
@@ -1,10 +1,14 @@
 PRGNAM="sage-bin"
-VERSION="8.3"
+VERSION="9.4"
 HOMEPAGE="http://www.sagemath.org"
 DOWNLOAD="UNSUPPORTED"
 MD5SUM=""
-DOWNLOAD_x86_64="http://mirrors.mit.edu/sage/linux/64bit/sage-8.3-Debian_GNU_Linux_9-x86_64.tar.bz2"
-MD5SUM_x86_64="a97ff237de39d74faedc06b9f4e1fbcc"
+DOWNLOAD_x86_64="http://mirrors.mit.edu/sage/linux/64bit/sage-9.4-Debian_GNU_Linux_11-x86_64.tar.bz2 \
+		 https://sourceforge.net/projects/slackbuildsdirectlinks/files/sage-bin/debian_binaries-11.2.tar.xz \
+		 https://sourceforge.net/projects/slackbuildsdirectlinks/files/sage-bin/debian_libraries-11.2.tar.xz \
+MD5SUM_x86_64="3128ef3530f514932cabcaf62b78030a \
+	       dc0f1b19c9b73821865599e1cefe66b6 \
+	       9380db91d6afbbc4e5a23ba13553d616"
 REQUIRES="mkchroot"
 MAINTAINER="Duncan Roe"
 EMAIL="duncan_roe@optusnet.com.au"