diff options
| author | Petar Petrov <slackalaxy@gmail.com> | 2020-01-05 18:28:32 -0600 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2020-01-12 08:48:02 +0700 |
| commit | 15f3312a7ef3a6bd36ac229bdf25c4a61c774b8b (patch) | |
| tree | db4ec24e0848727397baf8ddd80ab8fd73a28b80 /academic | |
| parent | 9a635a04ba5e148019b5c0a76c69e47abb8327e7 (diff) | |
| download | slackbuilds-15f3312a7ef3a6bd36ac229bdf25c4a61c774b8b.tar.gz | |
academic/RepeatMasker: Updated for version 4.1.0.
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
Diffstat (limited to 'academic')
| -rw-r--r-- | academic/RepeatMasker/README | 2 | ||||
| -rw-r--r-- | academic/RepeatMasker/RepeatMasker.SlackBuild | 9 | ||||
| -rw-r--r-- | academic/RepeatMasker/RepeatMasker.info | 6 |
3 files changed, 8 insertions, 9 deletions
diff --git a/academic/RepeatMasker/README b/academic/RepeatMasker/README index a62062fa85..536b0897a5 100644 --- a/academic/RepeatMasker/README +++ b/academic/RepeatMasker/README @@ -20,7 +20,7 @@ supports Dfam (profile HMM library derived from Repbase sequences) and Repbase, a service of the Genetic Information Research Institute. WARNING! -Due to the bundled databases, the installed size of this is 1.8 GiB! +Due to the bundled databases, the installed size of this is 2.1 GB! NOTE! The package is installed in /opt. After install go fo /opt/RepeatMasker diff --git a/academic/RepeatMasker/RepeatMasker.SlackBuild b/academic/RepeatMasker/RepeatMasker.SlackBuild index 48aa2372d3..b94763c2a8 100644 --- a/academic/RepeatMasker/RepeatMasker.SlackBuild +++ b/academic/RepeatMasker/RepeatMasker.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for RepeatMasker -# Copyright 2018-2019 Petar Petrov slackalaxy@gmail.com +# Copyright 2018-2020 Petar Petrov slackalaxy@gmail.com # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -23,11 +23,10 @@ # ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. PRGNAM=RepeatMasker -VERSION=${VERSION:-4.0.9_p2} +VERSION=${VERSION:-4.1.0} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} -SRCVER=${SRCVER:-4-0-9-p2} ARCH=noarch CWD=$(pwd) @@ -42,7 +41,7 @@ rm -rf $PKG mkdir -p $TMP $PKG $OUTPUT cd $TMP rm -rf $PRGNAM -tar xvf $CWD/$PRGNAM-open-$SRCVER.tar.gz +tar xvf $CWD/$PRGNAM-$VERSION.tar.gz cd $PRGNAM chown -R root:root . find -L . \ @@ -67,7 +66,7 @@ find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | gr # Better just copy these and not move them from their original dir mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION cp -a \ - bluegrad.jpg daterepeats.help HTMLAnnotHeader.html INSTALL LICENSE README.md repeatmasker.help \ + bluegrad.jpg daterepeats.help HTMLAnnotHeader.html INSTALL LICENSE README.md repeatmasker.help ReleaseNotes \ $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild cat $CWD/README.SLACKWARE > $PKG/usr/doc/$PRGNAM-$VERSION/README.SLACKWARE diff --git a/academic/RepeatMasker/RepeatMasker.info b/academic/RepeatMasker/RepeatMasker.info index 4f932a9042..62eacca432 100644 --- a/academic/RepeatMasker/RepeatMasker.info +++ b/academic/RepeatMasker/RepeatMasker.info @@ -1,8 +1,8 @@ PRGNAM="RepeatMasker" -VERSION="4.0.9_p2" +VERSION="4.1.0" HOMEPAGE="http://www.repeatmasker.org/" -DOWNLOAD="http://www.repeatmasker.org/RepeatMasker-open-4-0-9-p2.tar.gz" -MD5SUM="6e957630d698422245682701de2ce756" +DOWNLOAD="http://www.repeatmasker.org/RepeatMasker-4.1.0.tar.gz" +MD5SUM="936894df2b8291f42afce22a5793b4bf" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="perl-Text-Soundex trfind HMMER ncbi-rmblastn" |