academic/mpb: Added (computing electromagnetic band).

Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>

4 files changed, 220 insertions, 0 deletions

diff --git a/academic/mpb/README b/academic/mpb/README
new file mode 100644
index 0000000000..5d6b26c927
--- /dev/null
+++ b/academic/mpb/README
@@ -0,0 +1,37 @@
+mpb (computes electromagnetic band structures and modes)
+
+MPB is a free and open-source software package for computing electromagnetic
+band structures and modes. It saves results in hdf5 format.
+
+You may wish to also install: h5utils
+
+You very probably want to build a multi-processor version of this
+code by adding the "--with-openmp" configure option.
+
+
+Configuration:
+If the build script can find the ATLAS libraries, it will adapt the configure 
+options to use them rather than the default lapack.
+
+You can add additional options to the command line using the environment
+variable SBOPTIONS_MPB; e.g. to enable MPI (multi-processor calculation)
+using openmp, use:
+
+SBOPTIONS_MPB="--with-openmp" ./mpb.Slackbuild
+
+Alternatively, if building non-interactively (e.g. if using slpkg), use/create
+the file /etc/sbo_pkg_options.conf since this slackbuild script will search it
+for options. Simply include a line starting "mpb:" followed by options, e.g.:
+
+mpb: --with-openmp
+
+If you want to use mpich instead of openmp, you will have to recompile the
+installed slackware fftw library with two additional configure options, i.e.
+not only "--with-mpi" but also "--enable-type-prefix".
+
+Note:
+
+This mpb build script does *two* passes. This is so that when MPI
+support is enabled, the first compiles the mpb-data utility, then the second
+builds the full MPI version. The resulting package includes both, with any
+MPI version of the files replacing the non- MPI version.
diff --git a/academic/mpb/mpb.SlackBuild b/academic/mpb/mpb.SlackBuild
new file mode 100644
index 0000000000..11cecb63cb
--- /dev/null
+++ b/academic/mpb/mpb.SlackBuild
@@ -0,0 +1,154 @@
+#!/bin/sh
+
+# Slackware build script for mpb
+
+# Copyright 2019,2020 Paul Kinsler, U.K.
+# All rights reserved.
+#
+# Redistribution and use of this script, with or without modification, is
+# permitted provided that the following conditions are met:
+#
+# 1. Redistributions of this script must retain the above copyright
+#    notice, this list of conditions and the following disclaimer.
+#
+#  THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED
+#  WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF
+#  MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED.  IN NO
+#  EVENT SHALL THE AUTHOR BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
+#  SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
+#  PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
+#  OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
+#  WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
+#  OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
+#  ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
+
+PRGNAM=mpb
+VERSION=${VERSION:-1.10.0}
+BUILD=${BUILD:-1}
+TAG=${TAG:-_SBo}
+
+if [ -z "$ARCH" ]; then
+  case "$( uname -m )" in
+    i?86) ARCH=i586 ;;
+    arm*) ARCH=arm ;;
+       *) ARCH=$( uname -m ) ;;
+  esac
+fi
+
+CWD=$(pwd)
+TMP=${TMP:-/tmp/SBo}
+PKG=$TMP/package-$PRGNAM
+OUTPUT=${OUTPUT:-/tmp}
+
+if [ "$ARCH" = "i586" ]; then
+  SLKCFLAGS="-O2 -march=i586 -mtune=i686"
+  LIBDIRSUFFIX=""
+elif [ "$ARCH" = "i686" ]; then
+  SLKCFLAGS="-O2 -march=i686 -mtune=i686"
+  LIBDIRSUFFIX=""
+elif [ "$ARCH" = "x86_64" ]; then
+  SLKCFLAGS="-O2 -fPIC"
+  LIBDIRSUFFIX="64"
+else
+  SLKCFLAGS="-O2"
+  LIBDIRSUFFIX=""
+fi
+
+# change annoying underscores into hyphens
+SVERSION=$(echo $VERSION | tr '_' '-')
+# make a custom list of doc files in advance
+DOCFILES="AUTHORS COPYING COPYRIGHT TODO README.md NEWS.md"
+
+set -e
+
+rm -rf $PKG
+mkdir -p $TMP $PKG $OUTPUT
+cd $TMP
+rm -rf $PRGNAM-$SVERSION
+tar xvf $CWD/$PRGNAM-$SVERSION.tar.gz
+cd $PRGNAM-$SVERSION
+chown -R root:root .
+find -L . \
+ \( -perm 777 -o -perm 775 -o -perm 750 -o -perm 711 -o -perm 555 \
+  -o -perm 511 \) -exec chmod 755 {} \; -o \
+ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \
+  -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \;
+
+# if there is no configure script, try to build one!
+if [ ! -f ./configure ] ; then
+  ./autogen.sh
+fi
+
+LOCALCONFIGS=
+XDBFILE=/etc/sbo_pkg_options.conf
+
+if [ -f ${XDBFILE} ] ; then
+  LOCALCONFIGS=${LOCALCONFIGS}" "$(grep "^${PRGNAM}:" ${XDBFILE} | grep -v '^#' | awk -F: '{print$2}')
+  echo Build options selected by file: LOCALCONFIGS=${LOCALCONFIGS}
+fi
+if [  -n "${SBOPTIONS_MPB}" ] ; then
+  LOCALCONFIGS=${LOCALCONFIGS}" "${SBOPTIONS_MPB}
+  echo Build options selected by environment: LOCALCONFIGS=${LOCALCONFIGS}
+fi
+
+
+# check for the Atlas replacement for blas; if the libraries are found,
+#  add the configure option accordingly
+
+if [ -f /usr/lib${LIBDIRSUFFIX}/libatlas.a ] ; then
+  if [ -f /usr/lib{$LIBDIRSUFFIX}/libatlas.so ] ; then
+    echo "NOTICE: libatlas was found, configure --with-blas=atlas"
+    LOCALCONFIGS=${LOCALCONFIGS}" --with-blas=atlas"
+  fi
+fi
+
+#  LOCALCONFIGS without any mpi requests so I can do a no-mpi compile.
+SPLOCALCONFIGS=$(echo $LOCALCONFIGS | sed s/--with-mpi// | sed s/--with-openmp//)
+
+
+# do two passes; first with no mpi (to get mpb-data),
+# then a second *with* mpi
+
+CFLAGS="$SLKCFLAGS" \
+CPPFLAGS="$SLKCFLAGS" \
+./configure \
+  --prefix=/usr \
+  --mandir=/usr/man \
+  --libdir=/usr/lib${LIBDIRSUFFIX} \
+  --docdir=/usr/doc/$PRGNAM-$VERSION \
+  --build=$ARCH-slackware-linux \
+  $SPLOCALCONFIGS
+
+make
+make install DESTDIR=$PKG
+
+
+CFLAGS="$SLKCFLAGS" \
+CPPFLAGS="$SLKCFLAGS" \
+./configure \
+  --prefix=/usr \
+  --mandir=/usr/man \
+  --libdir=/usr/lib${LIBDIRSUFFIX} \
+  --docdir=/usr/doc/$PRGNAM-$VERSION \
+  --build=$ARCH-slackware-linux \
+  $LOCALCONFIGS
+
+make
+make install DESTDIR=$PKG
+
+find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \
+  | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true
+
+find $PKG/usr/man -type f -exec gzip -9 {} \;
+for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done
+
+
+mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION
+install -m 0644 $DOCFILES $PKG/usr/doc/$PRGNAM-$VERSION
+cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild
+
+mkdir -p $PKG/install
+cat $CWD/slack-desc > $PKG/install/slack-desc
+
+cd $PKG
+/sbin/makepkg -l y -c n $OUTPUT/$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.${PKGTYPE:-tgz}
diff --git a/academic/mpb/mpb.info b/academic/mpb/mpb.info
new file mode 100644
index 0000000000..b3575b5b0a
--- /dev/null
+++ b/academic/mpb/mpb.info
@@ -0,0 +1,10 @@
+PRGNAM="mpb"
+VERSION="1.10.0"
+HOMEPAGE="https://github.com/NanoComp/mpb"
+DOWNLOAD="https://github.com/NanoComp/mpb/releases/download/v1.10.0/mpb-1.10.0.tar.gz"
+MD5SUM="92f91cf5e0206e2e4531b780b45469c4"
+DOWNLOAD_x86_64=""
+MD5SUM_x86_64=""
+REQUIRES="lapack hdf5 libctl"
+MAINTAINER="PaulKinsler"
+EMAIL="dr.paul@kinsler.org"
diff --git a/academic/mpb/slack-desc b/academic/mpb/slack-desc
new file mode 100644
index 0000000000..90b4bc501d
--- /dev/null
+++ b/academic/mpb/slack-desc
@@ -0,0 +1,19 @@
+# HOW TO EDIT THIS FILE:
+# The "handy ruler" below makes it easier to edit a package description.
+# Line up the first '|' above the ':' following the base package name, and
+# the '|' on the right side marks the last column you can put a character in.
+# You must make exactly 11 lines for the formatting to be correct.  It's also
+# customary to leave one space after the ':' except on otherwise blank lines.
+
+   |-----handy-ruler------------------------------------------------------|
+mpb: mpb (computation of electromagnetic band structures and modes)
+mpb:
+mpb: MPB is a free and open-source software package for 
+mpb: computing electromagnetic band structures and modes.
+mpb:
+mpb:
+mpb:
+mpb: Homepage: https://github.com/NanoComp/mpb
+mpb:
+mpb:
+mpb: