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| author | Petar Petrov <petar.petrov@student.oulu.fi> | 2013-12-14 09:53:09 +0700 |
|---|---|---|
| committer | Erik Hanson <erik@slackbuilds.org> | 2013-12-14 10:53:06 -0600 |
| commit | d9759a11f4ba4278ed86def466dfc199a5207b95 (patch) | |
| tree | 0d424888f8a0cdb9c334f66a3c1fa4676614dde4 /academic/tophat/README | |
| parent | b7e03e6316cecca89c5f0444ade92faeb5320ede (diff) | |
| download | slackbuilds-d9759a11f4ba4278ed86def466dfc199a5207b95.tar.gz | |
academic/tophat: Added (Splice junction mapper for RNA-Seq reads).
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/tophat/README')
| -rw-r--r-- | academic/tophat/README | 10 |
1 files changed, 10 insertions, 0 deletions
diff --git a/academic/tophat/README b/academic/tophat/README new file mode 100644 index 0000000000..79c93851ff --- /dev/null +++ b/academic/tophat/README @@ -0,0 +1,10 @@ +TopHat is a fast splice junction mapper for RNA-Seq reads. It aligns +RNA-Seq reads to mammalian-sized genomes using the ultra high-throughput +short read aligner Bowtie, and then analyzes the mapping results to +identify splice junctions between exons. + +TopHat is a collaborative effort between the Institute of Genetic +Medicine at Johns Hopkins University, the Departments of Mathematics +and Molecular and Cell Biology at the University of California, +Berkeley and the Department of Stem Cell and Regenerative Biology at +Harvard University. |