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| author | Rob van Nues <sborg63@disroot.org> | 2020-03-07 07:30:51 +0700 |
|---|---|---|
| committer | Willy Sudiarto Raharjo <willysr@slackbuilds.org> | 2020-03-07 07:30:51 +0700 |
| commit | a0d23c9fd4256bd93e5441e760df753407954346 (patch) | |
| tree | 7b46abdb437bd2dc2adf5672e0ef25e81c8e70da /academic/pysam | |
| parent | 463c49a57d99a0cd68e106f6bb34cc18a14002c9 (diff) | |
| download | slackbuilds-a0d23c9fd4256bd93e5441e760df753407954346.tar.gz | |
academic/pysam: Updated for version 0.15.4.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
Diffstat (limited to 'academic/pysam')
| -rw-r--r-- | academic/pysam/pysam.SlackBuild | 9 | ||||
| -rw-r--r-- | academic/pysam/pysam.info | 8 |
2 files changed, 9 insertions, 8 deletions
diff --git a/academic/pysam/pysam.SlackBuild b/academic/pysam/pysam.SlackBuild index f5c3d8615e..91c17b0e1a 100644 --- a/academic/pysam/pysam.SlackBuild +++ b/academic/pysam/pysam.SlackBuild @@ -24,7 +24,7 @@ PRGNAM=pysam -VERSION=${VERSION:-0.15.3} +VERSION=${VERSION:-0.15.4} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} @@ -74,9 +74,10 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -#use system htslib instead -export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX -export HTSLIB_INCLUDE_DIR=/usr/include +###When pysam gets linked to htslib-1.10 this can be done again: +##use system htslib instead: +#export HTSLIB_LIBRARY_DIR=/usr/lib$LIBDIRSUFFIX +#export HTSLIB_INCLUDE_DIR=/usr/include if $PYTHON2; then python setup.py install --root=$PKG diff --git a/academic/pysam/pysam.info b/academic/pysam/pysam.info index a7747f8d20..8e87762f0f 100644 --- a/academic/pysam/pysam.info +++ b/academic/pysam/pysam.info @@ -1,10 +1,10 @@ PRGNAM="pysam" -VERSION="0.15.3" +VERSION="0.15.4" HOMEPAGE="https://github.com/pysam-developers/pysam" -DOWNLOAD="https://github.com/pysam-developers/pysam/archive/v0.15.3/pysam-0.15.3.tar.gz" -MD5SUM="f8586362c20c754bc698c04e32e11a63" +DOWNLOAD="https://pypi.python.org/packages/source/p/pysam/pysam-0.15.4.tar.gz" +MD5SUM="fed157466d6e267e32593119c05247b2" DOWNLOAD_x86_64="" MD5SUM_x86_64="" -REQUIRES="python3 htslib" +REQUIRES="python3-Cython" MAINTAINER="Rob van Nues" EMAIL="sborg63@disroot.org" |