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authorRob van Nues <rvnues at tesco {dot} net>2017-09-10 12:44:14 +0100
committerWilly Sudiarto Raharjo <willysr@slackbuilds.org>2017-09-16 07:15:01 +0700
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academic/flexbar: Added (barcode and adapter removal).
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+The program Flexbar preprocesses high-throughput sequencing data
+efficiently. It demultiplexes barcoded runs and removes adapter
+sequences. Moreover, trimming and filtering features are provided.
+Flexbar increases read mapping rates and improves genome as well as
+transcriptome assemblies. It supports next-generation sequencing data
+in fasta and fastq format, e.g. from Roche 454 and the Illumina
+platform.
+
+The script downloads the segan-library needed for compilation.
+
+References
+
+Johannes T. Roehr, Christoph Dieterich, Knut Reinert:
+Flexbar 3.0 - SIMD and multicore parallelization. Bioinformatics 2017.
+
+Matthias Dodt, Johannes T. Roehr, Rina Ahmed, Christoph Dieterich:
+Flexbar - flexible barcode and adapter processing for next-generation
+sequencing platforms. Biology 2012.