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author | Pedro Mendes <pedro@gepasi.org> | 2011-12-21 23:50:15 -0600 |
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committer | Robby Workman <rworkman@slackbuilds.org> | 2011-12-21 23:50:15 -0600 |
commit | 9639f2f744dad84cea8fe57bf7cc4e0b64ffb03c (patch) | |
tree | 88e0df4b63fe6e4701f8545599f7c075aaf24aa5 /academic/copasi/README | |
parent | d74ce3a23f591fdd59d28a475ff59d87852a7647 (diff) | |
download | slackbuilds-9639f2f744dad84cea8fe57bf7cc4e0b64ffb03c.tar.gz |
academic/copasi: Added (modeling/simulation of biochemical networks)
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
Diffstat (limited to 'academic/copasi/README')
-rw-r--r-- | academic/copasi/README | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/academic/copasi/README b/academic/copasi/README new file mode 100644 index 0000000000..e32cb06d9c --- /dev/null +++ b/academic/copasi/README @@ -0,0 +1,16 @@ +COPASI is a package for modeling and simulation of biochemical networks, +popular in the field of systems biology. + +COPASI is a stand-alone program that simulates models of biochemical +networks using ODE solvers or Gillespie's stochastic simulation +algorithm. COPASI is compatible with models in SBML format. It also +performs several analyses, such as steady state, stability, parameter +sensitivity, elementary modes, Lyapunov exponents, optimization, and +parameter estimation. Data can be visualized in plots, histograms and +animations of network diagrams. COPASI's GUI is based on QT, but a +command line version is also included that allows for processing +computations in batch mode. + +COPASI is a collaboration between research groups at the Virginia +Bioinformatics Institute, University of Heidelberg, University of +Manchester and previously in the EML-Research. |