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authorPetar Petrov <petar.petrov@student.oulu.fi>2015-04-11 18:20:35 +0700
committerWilly Sudiarto Raharjo <willysr@slackbuilds.org>2015-04-11 18:20:35 +0700
commit3f5f2cea710c6b601e3f55f17856ac6191717a40 (patch)
tree8994dba4226aa965b96e76e90e8605b530709345 /academic/aline/README
parent448e1d0f2d1401a9dbee7cf0f52cdb4935ae3ae6 (diff)
downloadslackbuilds-3f5f2cea710c6b601e3f55f17856ac6191717a40.tar.gz
academic/aline: Add option to change row length.
Signed-off-by: Willy Sudiarto Raharjo <willysr@slackbuilds.org>
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diff --git a/academic/aline/README b/academic/aline/README
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@@ -6,11 +6,15 @@ sequence alignment formats which the user can then alter, embellish,
markup etc to produce the kind of sequence figure commonly found in
biochemical articles.
-Please cite:
-Bond, C.S. and Schüttelkopf, A.W. (2009), Acta cryst. D65, 510-512
+NOTE
+The default row length is 100 residues. If you want to change that to
+something else (e.g. 1000) pass ROW=1000 to the script.
-NOTE:
+OPTIONAL
Although not needed for running Aline, clustalw and mkDSSP are
desirable for its complete functionality. A third tool is CHAINSAW,
part of the CCP4 suite (http://www.ccp4.ac.uk/). Visit the web site
for more information and installation instructions if you want it.
+
+CITING
+Bond, C.S. and Schüttelkopf, A.W. (2009), Acta cryst. D65, 510-512